SECTION A: THE LIBRARY
This section is holds the collection of various documents and books. An area is dedicated to the National writer Ruzar Briffa.
SECTION B: Gallery
This gallery holds historical printing machines used by the Augustinian Province in Malta.
SECTION C: DR A. CACHIA ESTATE
The estate of Dr A. Cachia and his family comprises of part of his collection. Dr A. Cachia was a collector of Maltese maps from various periods.
SECTION D: ARTEFACTS
The magazine was originally the main storage space which held the church damask, candelabras and other decorative objectives. Whilst keeping its original components it was adaptively restored.
SECTION E: MUSIC ARCHIVE
The Music Archive is a significant collection of music scores dating back to the 18th century. The collection includes works by Augustinian Maestri di Cappella.
SECTION F: THE PORTRAIT GALLERY
This area encompasses a collection of portraits connected to the Augustinian Order and its history. The collection includes some portraits by notable Maltese artists like Favray.
SECTION G: THE CHAPEL
The chapel was for a period used as a music room. During restoration the blocked recessed altar was opened. It now holds the silver collection.
SECTION H: THE ORATORY
The oratory was also restored and it has been adaptively restored to hold the titular paintings of the church which were substituted through the past centuries.